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- Table of Contents
Plan chromogenic IHC on paraffin sections using testis, where elongated or late spermatids show high staining (HPA tissue IHC). The guide covers fixation consistency, antibody titration, detection controls, and interpretation of processed ACRBP (UniProt).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Acrosomal vesicles expected; tissue compartment unverified (UniProt) | |
| Staining pattern | Selective staining of elongated or late spermatids; compartment unspecified (HPA tissue IHC) | |
| Antigen retrieval | Tris-EDTA pH 9.0 HIER, heat-mediated (datasheet A12806-1) | |
| Positive control | Testis | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Presumed off-target staining may complicate interpretation (HPA tissue IHC) | |
| Regulation | Expression is testis-restricted in normal tissue (UniProt) | |
| Isoform / epitope | No isoforms; epitopes in aa 26–273 may miss the mature form (UniProt) |
The catalog antibody’s IHC-P protocol is paired with published ACRBP staining methods for ovarian tissue and liposarcoma (PMC8589352; PMC4287229).
| Sample | Paraffin-embedded human tonsil tissue; fixative not specified (datasheet A12806-1) |
| Fixation | Image fixative and duration unreported (datasheet A12806-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: Tris-EDTA pH 9.0 (datasheet A12806-1); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit anti-ACRBP, 1:100-1:300 (datasheet A12806-1) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | ACRBP-positive staining in elongated or late spermatids of testis (HPA tissue IHC: High). HPA tissue profile: Selective expression in subsets of cells in seminiferous ducts. No signal in the no-primary control. |
ACRBP is an acrosomal secretory-vesicle protein with no transmembrane segment (UniProt Q8NEB7: localization, topology). In normal tissue, expect selective staining of elongated or late spermatids in seminiferous ducts, where HPA reports high staining (HPA: testis IHC). HPA rates the tissue profile Enhanced, while noting medium consistency with RNA data and disregarded presumed off-target binding (HPA: tissue IHC reliability).
| Strong staining in a subset of elongated or late spermatids, concentrated toward their heads. | This fits the high, selective testis IHC pattern (HPA: testis IHC) and acrosomal localization (UniProt Q8NEB7: localization). Score the relevant spermatids rather than the whole duct: other cells can make the section look mostly unstained despite a valid positive result. |
| Predominantly nuclear staining in testis, without a convincing spermatid-head pattern. | Treat this as a compartment mismatch requiring artifact review against the expected acrosomal pattern (UniProt Q8NEB7: localization). Do not dismiss all nuclear signal categorically: HPA reports approved nucleoplasmic staining in cultured-cell ICC-IF, which does not establish the expected testis IHC pattern (HPA: ICC-IF; testis IHC). |
| Staining mainly in unrelated cell types, with little signal in late spermatids. | Consider cross-reactivity or endogenous chromogenic activity before calling the section ACRBP-positive (standard IHC practice). HPA reports presumed off-target binding in its tissue assessment; its supported positive cell population is elongated or late spermatids (HPA: tissue IHC reliability; testis IHC). |
| Diffuse chromogen across the section, including cells expected to be negative. | This obscures the selective pattern reported in testis (HPA: testis IHC). Review background controls, blocking, detection chemistry and wash conditions (standard IHC practice). ACRBP is annotated as secreted, so extracellular signal alone should not be accepted as proof of the expected cell-specific pattern (UniProt Q8NEB7: localization). |
| No signal in a testis section containing elongated or late spermatids. | The known-positive cell population is present, so review assay performance before interpreting the result as absent ACRBP (HPA: testis IHC; standard IHC practice). Check control staining, antibody and detection steps, and whether the scored ducts contain the relevant spermatid stage. |
| Cell stage and scoring region | HPA places the high signal in elongated or late spermatids, within subsets of cells in seminiferous ducts (HPA: testis IHC). A duct without the relevant stage is a weak basis for judging assay sensitivity. |
| Secretory-vesicle location and topology | ACRBP is annotated in the acrosome and as secreted, with no transmembrane segment (UniProt Q8NEB7: localization, topology). Use cell identity and compartment together when interpreting chromogen; a membrane outline alone is not the predicted pattern. |
| Protein processing and epitope coverage | UniProt annotates a signal peptide at residues 1–25, a propeptide at 26–273, and a mature chain at 274–543 (UniProt Q8NEB7: processing). Antibody epitope location is not supplied, so the record cannot predict which processed form a given stain detects. |
| Antibody validation and tissue caveat | HPA marks HPA039082 IHC Enhanced and HPA039081 IHC Supported (HPA: antibody validation). The tissue profile is Enhanced but has medium RNA–staining consistency and presumed off-target binding that was disregarded (HPA: tissue IHC reliability); investigate unexpected staining independently. |
| Normal versus cancer tissue | UniProt describes normal-tissue expression as restricted to testis and reports expression in a spectrum of cancers (UniProt Q8NEB7: tissue specificity). The supplied HPA IHC observations establish a testis pattern; they do not establish an expected staining pattern for any particular tumor. |
| Situation | Likely cause | Next action |
|---|---|---|
| Testis positive control is blank. | Relevant late spermatids may be absent from the scored ducts, or an assay step may have failed (HPA: testis IHC; standard IHC practice). | Confirm the cell stage on the counterstained section, then check reagent application, detection and a working positive control (standard IHC practice). Do not infer ACRBP absence from a section lacking the expected cells. |
| Signal is weak but confined to the expected spermatids. | This is below the high staining level described for elongated or late spermatids, although slide and assay conditions can affect visible chromogen (HPA: testis IHC; standard IHC practice). | Check the positive control, detection and counterstain, then optimize the validated IHC procedure within its documented conditions (standard IHC practice). No ACRBP-specific retrieval or dilution requirement is supplied here. |
| Many cell types show brown signal. | Nonspecific antibody staining or endogenous detection activity can mimic a broad positive result (standard IHC practice); HPA also notes presumed off-target binding (HPA: tissue IHC reliability). | Compare a negative reagent control and detection-only control, assess endogenous activity, and require the selective spermatid pattern before scoring positive (standard IHC practice; HPA: testis IHC). |
| A crisp nuclear pattern dominates testis IHC. | It conflicts with the acrosomal localization annotation (UniProt Q8NEB7: localization), although HPA reports nucleoplasmic signal in ICC-IF (HPA: ICC-IF). | Check morphology, compartment assignment and controls; interpret the testis section against its selective late-spermatid IHC reference (HPA: testis IHC; standard IHC practice). |
| Background masks the spermatid pattern. | Inadequate blocking, washing or detection control can produce diffuse chromogen (standard IHC practice). The supplied sources do not identify a target-specific cause. | Review blocking and wash steps and inspect negative controls before changing the interpretation threshold (standard IHC practice). Reassess whether individual elongated or late spermatids can be distinguished (HPA: testis IHC). |
| Does an ICC-IF nuclear or vesicular image validate this IHC result? | HPA approves nucleoplasm and vesicles, with additional cytosol, in ICC-IF images from HEL, U-251MG and U2OS (HPA: ICC-IF). Those cultured-cell observations address a different application. | Use the testis cell-stage and acrosome-consistent pattern to judge paraffin IHC (HPA: testis IHC; UniProt Q8NEB7: localization). Consult the separate IF/ICC guide for that application's design. |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — Medium consistency between antibody staining and RNA expression data. Secreted protein, tissue location of RNA and protein is expected to differ. Presumed off target binding observed and disregarded.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Testis | Elongated or late spermatids | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Appendix | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Breast | Adipocytes | Not detected | Protein (IHC) | HPA → |
Troubleshoot ACRBP staining in paraffin sections by checking retrieval, expected spermatid staining, compartment, and controls before scoring (datasheet A12806-1; HPA tissue IHC; UniProt Q8NEB7).
A12806-1 has a human tonsil paraffin-section IHC image (catalog IHC caption). IF is listed for human, mouse, and rat (catalog applications/reactivity), but no IF image is supplied (catalog IF images).
A12806-1 is listed for IHC and IF in human, mouse, and rat (catalog applications/reactivity). Its IHC image shows a human tonsil paraffin section (catalog IHC caption); no IF image is supplied (catalog IF images).
Which to pick: For tissue IHC, choose A12806-1: its image documents Tris-EDTA retrieval at pH 9.0 and primary antibody at 1:200 overnight at 4 °C (catalog IHC caption); the fixative is unreported (catalog IHC caption). For IF/ICC, A12806-1 lists IF, but ICC and an IF image are unreported; its host is rabbit and clonality is unreported (catalog applications/IF images/host/clone). For cross-species work, A12806-1 lists mouse and rat reactivity, while the supplied IHC image documents human tissue only (catalog reactivity/IHC caption).