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Plan KIF2A staining in paraffin sections using the catalog antibody at 2–5 μg/ml (datasheet A03979-1). Compare cytoplasmic and nuclear staining with the tissue IHC profile, while assessing spindle staining in mitotic cells separately (HPA tissue IHC; UniProt).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic and nuclear staining in most tissues (HPA tissue IHC) | |
| Staining pattern | Most tissues show cytoplasmic and nuclear staining (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet A03979-1) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | Heart muscle+4 more · see all |
| Fixation | Keep fixation consistent across paraffin sections. (standard IHC practice; not target-specific) | |
| Caveat | Spindle enrichment varies with mitotic stage (UniProt) | |
| Regulation | PLK1 activity supports spindle targeting (UniProt) | |
| Isoform / epitope | 5 isoforms; check whether the epitope is shared (UniProt) |
The catalog antibody’s IHC-P protocol (datasheet A03979-1) is paired with two published KIF2A chromogenic IHC methods (PMC5537331; PMC9102491).
| Sample | Paraffin-embedded human lung cancer tissue; fixative not specified (datasheet A03979-1) |
| Fixation | Image fixative and duration unreported (datasheet A03979-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet A03979-1); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet A03979-1) |
| Primary antibody | Rabbit anti-KIF2A, 2-5 μg/ml (datasheet A03979-1) |
| Primary incubation | Overnight at 4 °C (datasheet A03979-1) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet A03979-1) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | KIF2A-positive staining in glandular cells of adrenal gland (HPA tissue IHC: High). HPA tissue profile: Cytoplasmic and nuclear expression in most tissues. No signal in the no-primary control. |
KIF2A staining is expected in the cytoplasm and nuclei of many tissues (HPA tissue IHC: cytoplasmic and nuclear expression in most tissues). Cytoplasmic staining is consistent with KIF2A at centrosomes and mitotic spindles (UniProt O00139: subcellular location). Suitable high-staining cells include cerebellar Purkinje cells, colon glandular cells and bone marrow hematopoietic cells (HPA tissue IHC: High). HPA rates its tissue IHC evidence Approved, with medium agreement between staining and RNA data (HPA tissue IHC: reliability). KIF2A has no transmembrane segment (UniProt O00139: topology).
| Cytoplasmic and nuclear staining in the expected cells, with occasional concentrated signal at a mitotic spindle or pole. | This fits the broad tissue pattern (HPA tissue IHC: cytoplasmic and nuclear expression). Spindle and pole localisation is biologically plausible from prophase through metaphase (UniProt O00139: subcellular location). Assess those structures only where mitotic cells are identifiable; a diffuse chromogenic deposit alone cannot establish spindle localisation (general IHC interpretation). |
| Staining is confined to cell borders or another unexpected compartment, without a matching cytoplasmic or nuclear pattern. | A border-only pattern is discordant with the reported tissue pattern (HPA tissue IHC: cytoplasmic and nuclear expression) and the absence of a transmembrane segment (UniProt O00139: topology). Treat it as a possible artefact and compare the positive control, morphology and detection-only control (general IHC practice). Nuclear staining by itself is not inherently misplaced (HPA tissue IHC: nuclear expression). |
| Strong staining appears in cardiomyocytes or kidney glomerular cells. | These specific populations were reported as not detected (HPA tissue IHC: heart cardiomyocytes; kidney glomerular cells). Check whether the signal follows tissue pigment, endogenous detection activity or an unrelated antibody reaction (general chromogenic IHC practice). An HPA negative observation is a comparison point, not proof that every specimen must be negative (HPA tissue IHC: Approved; medium consistency). |
| The whole section develops diffuse colour, including spaces outside cells. | A widespread deposit that ignores cell boundaries is inconsistent with the reported cell-associated pattern (HPA tissue IHC: cytoplasmic and nuclear expression). Review detection-only staining, endogenous enzyme blocking, antibody concentration and washes (general chromogenic IHC practice). Do not score diffuse background as KIF2A-positive cells (general IHC interpretation). |
| No staining is visible in an intended positive cell population. | Confirm that the sampled section contains the chosen cells: Purkinje cells, colon glandular cells and bone marrow hematopoietic cells have High reported staining (HPA tissue IHC). If they are present, review the IHC-validated antibody, retrieval and detection controls (general IHC practice). Absence in one section does not establish absence of KIF2A across that tissue (HPA tissue IHC: medium consistency). |
| Which cells make useful tissue comparisons? | Purkinje cells, colon glandular cells and bone marrow hematopoietic cells are reported High; cardiomyocytes and kidney glomerular cells are not detected (HPA tissue IHC). Compare the named cell populations, since a tissue contains multiple cell types (general IHC interpretation). |
| How strong is the tissue-pattern evidence? | HPA labels the IHC profile Approved and reports medium consistency between antibody staining and RNA expression (HPA tissue IHC: reliability). HPA004716 has Approved IHC validation; HPA004715 has Enhanced ICC validation, which does not establish IHC validation for that antibody (HPA antibodies: validation status). |
| Do isoforms or modifications predict this antibody's staining? | Five isoforms and nine modified residues are listed (UniProt O00139: isoforms; modified residues). The supplied sources give no antibody epitope or isoform coverage, so they cannot predict an isoform-specific tissue pattern or retrieval response (UniProt O00139: record scope; HPA antibodies: validation status). |
| Does topology suggest surface staining? | KIF2A has no transmembrane segment and no signal peptide; its annotated chain spans residues 1–706 (UniProt O00139: topology; processing). A surface-only result therefore warrants review, while these annotations alone do not specify an antibody epitope or its accessibility in paraffin sections (UniProt O00139: record scope). |
| What should an IF/ICC image show? | HPA reports enhanced nucleoplasm, centrosome and cytosol localisation; mitotic spindle localisation is uncertain in its ICC-IF summary (HPA subcellular: location and evidence labels). These cellular images can guide compartment checks, but they do not replace tissue IHC interpretation or provide an IF/ICC protocol (HPA subcellular: ICC-IF; HPA tissue IHC: tissue profile). |
| Situation | Likely cause | Next action |
|---|---|---|
| The positive-control section has no visible signal. | The expected cells may be absent from the section, or retrieval, primary incubation or chromogenic detection may have failed (general IHC practice). | First locate the intended cell population; colon glandular and cerebellar Purkinje cells are reported High (HPA tissue IHC). Then check the IHC-validated antibody and each detection step with appropriate process controls (general IHC practice). |
| A test tissue stains weakly while the positive control works. | The sampled population may have low reported staining: stomach glandular cells and adipocytes are listed Low (HPA tissue IHC). | Score the named cells against their expected level and inspect section morphology (HPA tissue IHC: Low populations; general IHC practice). Avoid interpreting a weak signal as an assay failure solely because another tissue stains strongly (HPA tissue IHC: variable levels). |
| Unexpected cell populations show strong chromogen. | Cross-reactivity or endogenous detection activity is possible (general chromogenic IHC practice); HPA reports some named populations as not detected (HPA tissue IHC). | Run a primary-omission control and assess endogenous enzyme blocking; compare the same cell population with HPA rather than the tissue name alone (general IHC practice; HPA tissue IHC: cell-specific levels). |
| Brown colour covers the section without cellular structure. | Background may arise from inadequate blocking, excess detection reagents or insufficient washing (general chromogenic IHC practice). | Check the detection-only control, wash steps and reagent concentration, then score only resolved cellular signal (general IHC practice). The reported pattern is cytoplasmic and nuclear within cells (HPA tissue IHC). |
| Signal appears only along membranes or tissue edges. | Edge-associated deposition or other nonspecific staining may mimic positivity (general IHC practice); KIF2A has no transmembrane segment (UniProt O00139: topology). | Inspect internal cells away from section edges and compare morphology and controls (general IHC practice). Seek cytoplasmic or nuclear staining in expected populations (HPA tissue IHC: tissue profile). |
| Nuclear IHC staining seems inconsistent with spindle-related KIF2A biology. | The sources describe different observations: tissue IHC includes nuclear staining, while UniProt annotates cytoplasmic spindle localisation (HPA tissue IHC: profile; UniProt O00139: subcellular location). | Retain nuclear staining as potentially expected when it is cell-associated and controls behave appropriately (HPA tissue IHC: nuclear expression; general IHC practice). Use cell morphology before attributing a discrete focus to a mitotic pole (UniProt O00139: spindle-pole localisation). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Medium consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | High | Protein (IHC) | HPA → |
| Appendix | Glandular cells | High | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | High | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | High | Protein (IHC) | HPA → |
| Caudate | Glial cells | High | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Heart muscle | Cardiomyocytes | Not detected | Protein (IHC) | HPA → |
| Kidney | Cells in glomeruli | Not detected | Protein (IHC) | HPA → |
| Liver | Cholangiocytes | Not detected | Protein (IHC) | HPA → |
| Oral mucosa | Squamous epithelial cells | Not detected | Protein (IHC) | HPA → |
| Ovary | Follicle cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot KIF2A staining in paraffin sections by checking retrieval, compartment patterns, controls and scoring against the documented IHC evidence.
A03979-1 has IHC images from human paraffin sections and an IF image from SiHa cells (catalog image captions). Listed reactivity covers human, mouse, rat, and monkey (catalog reactivity).
A03979-1 is shown in IHC on paraffin sections of human lung cancer, pancreatic cancer, and placenta (catalog IHC captions). The same SKU is shown in IF on SiHa cells and lists both IF and ICC applications (catalog IF caption; catalog applications).
Which to pick: For tissue IHC, choose A03979-1: its caption documents a human paraffin section with EDTA retrieval and DAB detection; the fixative is unreported (A03979-1 IHC caption). For IF/ICC, A03979-1 lists both applications and shows IF in SiHa cells (catalog applications; A03979-1 IF caption). For cross-species work, A03979-1 lists human, mouse, rat, and monkey reactivity, while its provided IHC images document human tissue (catalog reactivity; catalog IHC captions).