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- Table of Contents
PDPK1 · Western blot design guide
PDPK1 Western Blot Planning Guide
Plan a PDPK1 Western blot around the catalog-observed 63.2 kDa band, image-backed PB9735 evidence, HPA controls, and verified protocol records.
Evidence assembled July 2026 · For research use; verify linked source records and product datasheet before use
PDPK1 Western Blot Experimental Design Guide
Expected bands, documented protocol parameters, controls and antibodies — the at-a-glance facts below, then the full design guide.
Must know before running
| Expected band | 63.2 kDa | |
| Observed band | Not reported — verify product WB image | |
| Gel | 12-15% | |
| Positive control | Cerebellum | |
| Negative control | Soft tissue |
Important caveats
Reasons your observed band may differ from the expected size.
| ⓘ | Calculated mass | 63.2 kDa |
| ⓘ | Localization | Cytoplasm / Nucleus |
| ⓘ | Processing / PTM | Record-dependent |
| ⓘ | Reactivity | Human / Mouse / Rat |
Section 1
Real Curated PDPK1 Western Blot Protocols
Start with the molecular-weight rule, then compare verified publication-derived conditions.
| Sample / lysate | Bone marrow |
| Gel % | 12-15% |
| Load | 20-30 µg total protein per lane |
| Transfer | Semi-dry, standard transfer |
| Membrane | 0.45 µm PVDF |
| Blocking | 5% non-fat milk or 5% BSA in TBST |
| Primary | PB9735 at datasheet starting dilution |
| Primary incubation | Overnight at 4 °C with gentle agitation |
| Secondary | Species-matched HRP conjugate at validated dilution |
| Wash | 3 × 5 min in TBST |
| Detection | Chemiluminescent substrate |
| Exposure | Bracket exposures to avoid saturation |
Section 2
What Is the Expected PDPK1 Western Blot Band Size?
Use the product-observed 63.2 kDa band as the primary planning value and retain the UniProt calculated mass as context.
| 63.2 kDa | Matches the authoritative product WB observation. |
| 63.2 kDa calculated | Use as UniProt context, not as a replacement observed band. |
| Unexpected additional signal | Do not assign identity without orthogonal positive/negative controls. |
💡Expected PDPK1 appearancePlan around 63.2 kDa and keep the calculated mass as supporting context.
| Catalog-observed band | 63.2 kDa; use this as the primary experimental expectation. |
| Calculated mass | 63.2 kDa from UniProt O15530; retain as context. |
| Gel selection | 12-15%; shared with the recommended protocol and poster. |
| Specificity check | Compare the lead HPA positive and negative controls with PB9735. |
| Situation | Likely cause | Next action |
|---|---|---|
| 63.2 kDa | Matches the authoritative product WB observation. | Confirm with orthogonal controls and the linked product record. |
| Additional band | May reflect processing, modification, or non-specific signal. | Run a dilution series and compare positive/negative controls. |
| Weak signal | Target abundance or transfer may be limiting. | Verify transfer, increase positive-control abundance, and bracket exposure. |
Experiment evidence
Western blot images showing PDPK1 band
PB9735 · PDPK1
← swipe / scroll for more images →
Real WB data behind the band-size expectations in this section.
Sample controls for PDPK1 Western blot
🧪Use Cerebellum as the first positive-control candidate and Soft tissue as the HPA Not detected negative candidate.
Positive control: Cerebellum (High)
Negative control: Soft tissue (Not detected)
HPA protein score determines control status; other expression data is supporting context only.
HPA tissue expression evidence for PDPK1
Comprehensive Human Protein Atlas IHC scoring per tissue. Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
Positive expression · recommended positive controls
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Cerebellum | Reported tissue cells | High | Protein (HPA) | HPA → |
| Testis | Reported tissue cells | High | Protein (HPA) | HPA → |
| Spleen | Reported tissue cells | High | Protein (HPA) | HPA → |
| Bone marrow | Reported tissue cells | High | Protein (HPA) | HPA → |
Section 3
Advanced PDPK1 Western Blot Tips
Deeper troubleshooting and optimisation questions for PDPK1, answered from its protein features.
Which band should guide the blot?
Use 63.2 kDa, the observation attached to the authoritative PB9735 WB record.
How should calculated mass be interpreted?
Treat the UniProt calculated mass as context; it does not replace the catalog-observed 63.2 kDa expectation.
Which positive control should I start with?
Start with Cerebellum, the lead HPA protein-expression candidate.
Which negative control is defensible?
Use Soft tissue as an orthogonal HPA Not detected candidate.
Which gel should I use?
Use 12-15% consistently across the quick facts, protocol table, and poster.
What transfer method to use for PDPK1 Western blot?
Use the transfer method in the recommended protocol and verify transfer before blocking.
How should PB9735 be started?
Start at the linked datasheet condition and run a three-point primary-antibody dilution test.
Which publication-derived protocols can I compare?
No verified publication protocol was supplied; use only the deterministic recommended protocol.
Boster reagents
PDPK1 Western Blot Reagents
Human/Mouse/Rat-reactive PDPK1 Western blot reagents with authoritative product imagery.
Real WB data
Anti-PDPK1 Antibody Picoband®
Cat # PB9735
Only image-backed, WB-validated Human/Mouse/Rat recommendations from the prepared catalog evidence are shown.
Source: prepared picoband-wb product evidence; each card retains its own SKU, URL, observed band, and authoritative WB image.
References
- UniProt O15530
- Human Protein Atlas — PDPK1
- PB9735 product record
- PMC7222611 — Niao Du Kang Mixture Increases the Expression of mir-129-5p to Relieve Renal Fibrosis (Evidence-based complementary and alternative medicine : eCAM, 2020)
- PMC5742731 — The enhancement of combination of berberine and metformin in inhibition of DNMT1 gene expression through interplay of SP1 and PDPK1 (Journal of cellular and molecular medicine, 2018)
- PMC4689617 — Phosphoinositide dependent protein kinase 1 is required for exercise-induced cardiac hypertrophy but not the associated mitochondrial adaptations (Journal of molecular and cellular cardiology, 2015)
