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- Table of Contents
Plan chromogenic ST18 IHC in paraffin sections using the catalog antibody’s 1:100–1:300 dilution range (datasheet A10267-1). Compare nuclear and cytoplasmic staining with HPA tissue observations, bearing in mind its uncertain reliability rating (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Nuclear and cytoplasmic tissue staining (HPA tissue IHC) | |
| Staining pattern | General nuclear and cytoplasmic staining (HPA tissue IHC) | |
| Antigen retrieval | Tris-EDTA pH 9.0 HIER, heat-mediated (datasheet A10267-1) | |
| Positive control | Cerebral cortex+4 more · see all | |
| Negative control | Appendix+2 more · see all |
| Fixation | Keep fixation consistent across paraffin sections (standard IHC practice; not target-specific) | |
| Caveat | Antibody staining has low concordance with RNA (HPA tissue IHC) | |
| Regulation | ST18 abundance regulation is unreported (UniProt) | |
| Isoform / epitope | No isoforms or cleavage annotated; epitope dependence unknown (UniProt) |
Start with the catalog antibody’s IHC-P protocol, then compare the published ST18 staining conditions for mouse embryonic cryosections (PMC9751150).
| Sample | Paraffin-embedded human tonsil tissue; fixative not specified (datasheet A10267-1) |
| Fixation | Image fixative and duration unreported (datasheet A10267-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: Tris-EDTA pH 9.0 (datasheet A10267-1); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit anti-ST18, 1:100-1:300 (datasheet A10267-1) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | ST18-positive staining in neuronal cells of cerebral cortex (HPA tissue IHC: High). HPA tissue profile: General nuclear and cytoplasmic expression. No signal in the no-primary control. |
ST18 is annotated as nuclear and has no transmembrane segment (UniProt O60284). In tissue IHC, look for staining in cerebral cortical neurons, kidney tubule cells, smooth muscle cells, and stomach glandular cells, where HPA reports high staining (HPA tissue IHC). HPA also describes general nuclear and cytoplasmic expression, but rates the tissue pattern Uncertain because antibody staining and RNA expression show low consistency (HPA tissue IHC).
| Distinct nuclear staining in cerebral cortical neurons, kidney tubule cells, smooth muscle cells, or stomach glandular cells. | This fits the UniProt nuclear annotation and HPA high-staining cell groups (UniProt O60284; HPA tissue IHC). Score the named cells and compartment separately: HPA reports general nuclear and cytoplasmic staining, so nuclear predominance is an expectation, not a validated nuclear-only rule (HPA tissue IHC). |
| Staining appears chiefly at cell borders or in a membrane-like pattern, with little nuclear signal. | Treat the compartment mismatch as a possible staining artefact: UniProt places ST18 in the nucleus and reports no transmembrane segment (UniProt O60284). Review morphology and the detection controls before assigning membrane staining to ST18. HPA's reported cytoplasmic component does not establish membrane localisation (HPA tissue IHC). |
| Strong staining appears in cell groups outside the HPA high-staining groups, especially where a control section also stains. | Consider cross-reactivity or endogenous detection activity as general IHC possibilities, then check a no-primary control and cell identity. HPA reports some additional cell groups at medium or low levels, so an unexpected cell group alone does not prove a false positive (HPA tissue IHC). |
| Colour is diffuse across cells, extracellular areas, or much of the section, without a readable compartment. | The distribution cannot establish ST18 localisation. Assess general IHC causes such as background from the detection system or inadequate blocking, and compare with a no-primary control. The reference pattern is general nuclear and cytoplasmic expression in tissue, with Uncertain reliability (HPA tissue IHC). |
| A cerebral cortex, kidney, smooth muscle, or stomach section shows no staining in the named cells. | First verify that the expected cell population is present and that the IHC run worked. These are high-staining examples in HPA, not guaranteed positive controls: its tissue assessment is Uncertain and pending external verification (HPA tissue IHC). An absent signal alone cannot establish absent ST18 protein. |
| Compartment and topology | UniProt annotates ST18 in the nucleus and reports no transmembrane segment (UniProt O60284). Use those facts to assess a proposed membrane pattern; HPA's tissue IHC profile also reports cytoplasmic staining, so compartment alone cannot validate antibody specificity (HPA tissue IHC). |
| Choice of tissue and cell population | HPA reports high staining in cerebral cortical neurons, kidney tubule cells, smooth muscle cells, and stomach glandular cells; it reports medium, low, and undetected groups elsewhere (HPA tissue IHC). Compare the relevant cells within each section instead of treating every cell as an equivalent control. |
| Strength of the tissue evidence | HPA rates the tissue IHC pattern Uncertain because antibody staining has low consistency with RNA expression; external verification is pending (HPA tissue IHC). Its high and undetected examples are useful comparison points, but neither category alone confirms an antibody's specificity. |
| Antibody-level validation | The listed antibody, HPA044919, is a rabbit polyclonal with IHC status Uncertain (HPA antibodies). Interpret its staining alongside tissue morphology and controls; the supplied record provides no stronger antibody-level validation claim. |
| IF/ICC evidence | HPA lists no main subcellular location and no cell lines with ICC-IF images for ST18 (HPA subcellular). The UniProt nuclear annotation is a starting expectation for IF/ICC, but the supplied HPA record does not show an IF/ICC staining pattern (UniProt O60284; HPA subcellular). |
| Situation | Likely cause | Next action |
|---|---|---|
| The expected cells are blank in a candidate positive section. | The cell group may be absent from the field, or the IHC run may have failed; HPA high staining is an Uncertain observation (HPA tissue IHC). | Locate the named cells on the counterstained section, check the run's general positive control, and compare another HPA high-staining tissue if available. Do not call the result biological absence from a single blank section (HPA tissue IHC). |
| Only cell borders stain strongly. | A membrane-like pattern conflicts with the nuclear annotation and lack of a transmembrane segment (UniProt O60284). | Check the no-primary control and review whether the colour follows cell borders or nuclear structures. Record the mismatch rather than scoring border staining as confirmed ST18; HPA reports nuclear and cytoplasmic tissue staining (HPA tissue IHC). |
| Unexpected cells stain more strongly than the HPA high-staining cell groups. | Cross-reactivity or endogenous detection activity is possible in general IHC; HPA's tissue assessment is Uncertain (HPA tissue IHC). | Confirm the stained cell type by morphology, inspect a no-primary control, and compare the HPA cell-specific entries. HPA also reports medium and low staining in other groups, so assess the full pattern before rejecting it (HPA tissue IHC). |
| The whole section has weak, diffuse colour. | General IHC background can obscure compartment and cell-specific interpretation. | Compare the no-primary control, review blocking and detection conditions, and score only distinguishable cellular staining. HPA's reported general nuclear and cytoplasmic profile is not a reason to count uniform section-wide colour as positive (HPA tissue IHC). |
| A tissue listed as undetected shows staining. | The apparent conflict could reflect background or a real difference between samples; HPA's IHC pattern has Uncertain reliability (HPA tissue IHC). | Verify the named cell population and compare a no-primary control. HPA lists appendix glandular cells, parathyroid glandular cells, and splenic red-pulp cells as not detected; treat these as comparison observations, not absolute negative standards (HPA tissue IHC). |
| Can the tissue IHC pattern be used as an IF/ICC expectation? | HPA provides no ICC-IF image-bearing cell lines or main subcellular location for ST18 (HPA subcellular). | Use UniProt's nuclear annotation as an initial localisation expectation, then assess IF/ICC controls on its own guide page. Do not transfer HPA's tissue staining intensity to an IF/ICC result (UniProt O60284; HPA tissue IHC; HPA subcellular). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Uncertain — Low consistency between antibody staining and RNA expression data. Pending external verification.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Cerebral cortex | Neuronal cells | High | Protein (IHC) | HPA → |
| Kidney | Cells in tubules | High | Protein (IHC) | HPA → |
| Smooth muscle | Smooth muscle cells | High | Protein (IHC) | HPA → |
| Stomach | Glandular cells | High | Protein (IHC) | HPA → |
| Adipose tissue | Adipocytes | Medium | Protein (IHC) | HPA → |
Troubleshoot ST18 staining in paraffin sections by checking retrieval, nuclear localisation, controls and scoring; interpret discordant patterns cautiously (UniProt O60284; HPA tissue IHC).
Two anti-ST18 antibodies cover paraffin-section IHC in human tissue (catalog IHC captions); both list Human, Mouse and Rat reactivity (catalog reactivity), and one also lists IF (catalog applications).
A10267 will render with an IHC image of paraffin-embedded human colorectal carcinoma at 1:50 (A10267 IHC caption). A10267-1 will render with an IHC image of paraffin-embedded human tonsil at 1:200 and also lists IF as an application (A10267-1 IHC caption; catalog applications).
Which to pick: For tissue IHC, choose the image-matched SKU: A10267 for paraffin-embedded human colorectal carcinoma or A10267-1 for paraffin-embedded human tonsil (respective IHC captions); the fixative is unreported in both captions. For IF, choose A10267-1 because IF is listed for that SKU, while ICC validation and an IF image are unreported (A10267-1 catalog applications and images). Both are rabbit antibodies with no clone specified and list Human, Mouse and Rat reactivity, but their displayed IHC evidence is human tissue only (catalog host, clone and reactivity; respective IHC captions).