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- Table of Contents
Plan chromogenic GRK6 IHC in paraffin sections using the IHC-validated antibody at a starting concentration of 5 μg/mL (datasheet). Compare cytoplasmic staining across cell populations, with immune-cell subsets expected to stain most strongly (HPA tissue IHC).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic staining in tissue (HPA tissue IHC) | |
| Staining pattern | Broad cytoplasmic staining; strongest in immune-cell subsets (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6.0 HIER, 95–98 °C, 20 min (rule: cytoplasmic / membrane antigen) | |
| Positive control | Adrenal gland+4 more · see all | |
| Negative control | Liver+2 more · see all |
| Fixation | Keep fixation consistent across paraffin sections (standard IHC practice; not target-specific) | |
| Caveat | Staining has low concordance with RNA expression (HPA tissue IHC) | |
| Regulation | RNA is enhanced in bone marrow (HPA tissue RNA) | |
| Isoform / epitope | 3 isoforms; no transmembrane segment; map the epitope (UniProt) |
The catalog antibody protocol is paired with one published GRK6 IHC protocol using rat striatal paraffin sections (PMC3864941).
| Sample | Tissue sections; selected-image fixative not specified (standard IHC workflow) |
| Fixation | Image fixative and duration unreported (datasheet A03623-1); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat-induced epitope retrieval in citrate buffer, pH 6.0, 20 min at 95–98 °C (standard rule: cytoplasmic / membrane antigen) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit anti-GRK6, 5 μg/mL (datasheet A03623-1) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | GRK6-positive staining in glandular cells of adrenal gland (HPA tissue IHC: High). HPA tissue profile: Ubiquitous cytoplasmic expression, most abundant in subsets of immune cells. No signal in the no-primary control. |
In paraffin-section IHC, expect predominantly cytoplasmic GRK6 staining, often strongest in subsets of immune cells (HPA: tissue IHC profile). GRK6 is also associated with membranes but has no transmembrane segment (UniProt P43250: subcellular location and topology). HPA rates its tissue IHC data Approved while reporting low consistency between antibody staining and RNA expression; interpret individual tissue patterns with that limitation (HPA: tissue IHC reliability).
| Cytoplasmic stain is strong in kidney tubule cells or colon glandular cells. | Both cell populations are listed as High in HPA tissue IHC (HPA: kidney and colon). Score the named cells against neighboring tissue and the section's negative control; a strong signal alone does not resolve the reported staining–RNA inconsistency (HPA: reliability description). |
| Stain is predominantly nuclear, with little cytoplasmic signal. | That distribution departs from HPA's ubiquitous cytoplasmic IHC profile (HPA: tissue IHC). Review morphology and counterstain, then repeat with appropriate controls before assigning GRK6 to nuclei. Membrane association without a transmembrane segment does not predict a nuclear IHC pattern (UniProt P43250: location and topology). |
| Strong stain appears in liver cholangiocytes or oral squamous epithelium. | HPA lists these cells as Not detected (HPA: liver and oral mucosa). Check whether the stained cells were identified correctly; persistent signal may reflect cross-reactivity or endogenous detection activity (general IHC practice). A negative HPA entry is a comparison point, not proof that every specimen must be blank. |
| Brown signal spreads across tissue, including spaces or cells lacking clear morphology. | Treat diffuse, poorly localized color as background until controls support a cellular pattern (general IHC practice). Compare a no-primary control, inspect washing and blocking, and avoid calling weak widespread color positive solely because GRK6 is widely expressed (UniProt P43250: tissue specificity). |
| Kidney tubules and lymph-node non-germinal-center cells show no signal. | Both are listed as High in HPA tissue IHC (HPA: kidney and lymph node). First verify that the expected cell populations are present. If they are, check the staining run and antibody conditions; absence in one section cannot establish absent GRK6 expression. |
| Tissue and cell selection | GRK6 is widely expressed (UniProt P43250: tissue specificity), yet HPA reports different cell-level IHC results: kidney tubules High, salivary glandular cells Low, and liver cholangiocytes Not detected (HPA: tissue IHC). Choose comparison cells by cell type, not by organ name alone. |
| Subcellular evidence across applications | HPA describes cytoplasmic tissue IHC but approved mitochondrial localization in ICC-IF (HPA: tissue IHC and subcellular ICC-IF). UniProt lists GRK6 as membrane-associated without a transmembrane segment (UniProt P43250: location and topology). These observations should be recorded by assay rather than forced into one identical visual pattern. |
| Antibody validation | HPA lists two antibodies with Approved IHC status, HPA015327 and HPA018903 (HPA: antibodies). The tissue IHC profile also carries a low-consistency warning against RNA expression (HPA: reliability description). Use controls and cell-level comparisons when interpreting an unexpected stain. |
| Isoforms and epitope coverage | UniProt lists three isoforms, GRK6A, GRK6B and GRK6C (UniProt P43250: isoforms). The supplied record does not map either antibody's epitope to those isoforms, so an isoform-specific IHC interpretation is unsupported without further antibody information. |
| Processing and modified residues | UniProt lists no signal peptide or propeptide and identifies several phosphorylated residues (UniProt P43250: processing and modified residues). The payload provides no evidence that these features change paraffin-section staining, retrieval needs or tissue positivity; do not use them to explain a failed stain. |
| Situation | Likely cause | Next action |
|---|---|---|
| Expected positive cells are blank. | An absent signal in HPA-High kidney tubules or colon glands may indicate a staining-run problem, though specimen-level variation remains possible (HPA: tissue IHC; general IHC practice). | Confirm the expected cells are present; inspect a positive control, antibody dilution, retrieval record and detection reagents (general IHC practice). No GRK6-specific retrieval condition or dilution is supplied. |
| The whole section has a diffuse brown haze. | Background can arise from incomplete blocking, washing or detection controls (general IHC practice). The haze does not match HPA's described cellular cytoplasmic pattern (HPA: tissue IHC). | Compare the no-primary control; review blocking, washes and chromogen development, then score only stain tied to identifiable cells (general IHC practice). |
| Signal is strong in an HPA Not detected cell population. | Misidentified cells, cross-reactivity or endogenous detection activity are possibilities (HPA: liver cholangiocytes, oral and vaginal squamous epithelium; general IHC practice). | Recheck morphology and an appropriate negative control. If signal persists, describe the observation and the HPA discrepancy instead of treating either as definitive. |
| Staining appears predominantly nuclear. | This conflicts with the HPA cytoplasmic tissue IHC profile; a nuclear pattern is not established by UniProt's membrane annotation (HPA: tissue IHC; UniProt P43250: location). | Check counterstain, cellular boundaries and controls. Repeat the IHC stain if needed before reporting nuclear GRK6 (general IHC practice). |
| A weak signal is difficult to score in salivary glandular cells. | HPA lists these cells as Low, whereas kidney tubule cells are High (HPA: tissue IHC). A faint result can therefore be harder to distinguish from background. | Compare identifiable glandular cells with a no-primary control and a suitable HPA-High tissue on the same run; report uncertain signal as equivocal (general IHC practice). |
| IF/ICC shows mitochondria while tissue IHC looks cytoplasmic. Is that inconsistent? | HPA reports approved mitochondrial localization for ICC-IF and a cytoplasmic profile for tissue IHC (HPA: subcellular ICC-IF and tissue IHC). The assays describe localization at different visual resolutions. | Record each assay's observed compartment and controls separately. Do not require a mitochondrial pattern to score paraffin-section chromogenic IHC (HPA: tissue IHC and subcellular ICC-IF). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Low consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | High | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | High | Protein (IHC) | HPA → |
| Caudate | Neuronal cells | High | Protein (IHC) | HPA → |
| Colon | Glandular cells | High | Protein (IHC) | HPA → |
| Duodenum | Glandular cells | High | Protein (IHC) | HPA → |
Troubleshoot GRK6 chromogenic IHC in paraffin sections by checking retrieval, compartment, cell type and controls before comparing staining intensity.
A03623-1 has IHC and IF images from human small intestine (catalog image captions). Its listed reactivity covers human, mouse and rat (catalog reactivity).
A03623-1 will render with its human small intestine IHC image at 5 μg/mL (A03623-1 IHC image caption). The catalog also lists IF and shows human small intestine IF at 20 μg/mL (catalog applications; A03623-1 IF image caption).
Which to pick: For tissue IHC, choose A03623-1: IHC-P is listed and its own IHC image shows human small intestine at 5 μg/mL; the fixative is unreported (catalog applications; A03623-1 IHC image caption). For IF, choose the same SKU based on its human small intestine IF image at 20 μg/mL; ICC validation is unreported (A03623-1 IF image caption; catalog applications). For mouse or rat samples, A03623-1 is the listed cross-species option, though the supplied IHC and IF images are human only (catalog reactivity; catalog image captions).