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- Table of Contents
Plan paraffin-section LAMC1 IHC around basement membrane and smooth muscle staining (HPA tissue IHC). The catalog antibody PA1581 has a stated IHC dilution of 0.5–1 μg/ml (datasheet).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Basement membrane and extracellular matrix (UniProt) | |
| Staining pattern | Basement membrane and smooth muscle staining (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6.0 HIER, 95–98 °C, 20 min (rule: cytoplasmic / membrane antigen) | |
| Positive control | Placenta+4 more · see all | |
| Negative control | Adrenal gland+4 more · see all |
| Fixation | Keep fixation consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Secreted LAMC1 may stain away from RNA-positive cells (HPA tissue IHC) | |
| Regulation | No expression regulator specified (UniProt) | |
| Isoform / epitope | No listed isoforms; signal peptide 1–33 is removed (UniProt) |
The catalog antibody protocol (datasheet) is accompanied by a published IHC protocol for endometrial specimens (PMC7044014 methods).
| Sample | Tissue sections; selected-image fixative not specified (standard IHC workflow) |
| Fixation | Image fixative and duration unreported (datasheet PA1581); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat-induced epitope retrieval in citrate buffer, pH 6.0, 20 min at 95–98 °C (standard rule: cytoplasmic / membrane antigen) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit anti-LAMC1, 0.5-1μg/ml (datasheet PA1581) |
| Primary incubation | Overnight at 4 °C (standard) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | LAMC1-positive staining in cytotrophoblasts of placenta (HPA tissue IHC: High). HPA tissue profile: Expression in basement membranes and smooth muscle. No signal in the no-primary control. |
LAMC1 is a secreted laminin subunit concentrated in extracellular matrix and basement membranes, with no transmembrane segment (UniProt P11047). In paraffin-section IHC, expect staining that outlines basement membranes and may accompany smooth muscle; HPA reports high staining in placental cytotrophoblasts and medium staining in several other cell populations (HPA: tissue IHC). HPA rates the tissue pattern Enhanced, while noting that secreted protein can complicate agreement between cellular staining and RNA expression (HPA: reliability description).
| Continuous staining outlines tissue structures, with strong signal around placental cytotrophoblasts. | This fits a basement-membrane protein and the reported high placental cytotrophoblast staining (UniProt P11047; HPA: High in cytotrophoblasts). Assess the outline and surrounding matrix as well as the cells named in HPA's scoring table; a secreted protein need not remain where its RNA was made (HPA: reliability description). |
| Most signal is sharply nuclear, with little basement-membrane staining. | A predominantly nuclear IHC pattern conflicts with the reported extracellular and basement-membrane location (UniProt P11047). Treat it as suspect until a no-primary control and an independently validated antibody support it; HPA's IHC validation does not establish nuclear localisation (HPA: antibody IHC Enhanced). |
| Strong staining appears in cells scored as not detected, such as bone-marrow hematopoietic cells. | HPA reports no detected staining in that specific cell population, so strong cellular signal merits investigation (HPA: Not detected in hematopoietic cells). Compare nearby basement membranes before assigning it to the cells; cross-reactivity or endogenous detection activity are possible general IHC causes. |
| Brown signal coats most of the section without a discernible structural outline. | Diffuse staining makes the expected basement-membrane pattern difficult to judge (UniProt P11047; HPA: basement membranes and smooth muscle). General IHC causes include nonspecific antibody binding, insufficient washing, or excess chromogen development; a no-primary control helps separate detection background from primary-antibody staining. |
| A placental section has no discernible LAMC1 signal. | Absence in a reported high-staining population raises a technical concern, although an individual section and protocol need their own validation (HPA: High in cytotrophoblasts). Check that the section contains the relevant cells, then review antibody performance and detection controls before interpreting a biological loss. |
| Extracellular topology | LAMC1 is secreted and lacks a transmembrane segment (UniProt P11047). Read a linear extracellular outline as biologically plausible; do not require uniform staining throughout a cell to call the section positive. |
| Tissue and cell context | HPA records high staining in placental cytotrophoblasts and medium staining in kidney glomerular cells and smooth-muscle cells (HPA: tissue IHC). Its not-detected entries describe named cell populations, not every structure in those tissues (HPA: tissue IHC). |
| Validation and interpretation | Four listed antibodies have Enhanced IHC status (HPA: antibody validation). HPA also notes medium consistency between staining and RNA data because secreted variants can appear away from their site of production (HPA: reliability description). Judge the slide by its structures and controls. |
| Processing and modifications | UniProt lists a signal peptide at residues 1–33 and a mature chain at 34–1609, plus 14 glycosylation sites (UniProt P11047). Epitope location may matter when comparing antibodies, but these annotations alone do not predict antigen-retrieval needs or fixation sensitivity. |
| IF/ICC Q&A: Should intracellular fluorescence match IHC? | HPA lists plasma-membrane and endoplasmic-reticulum ICC/IF locations as uncertain (HPA: subcellular). Interpret those images cautiously alongside the established secreted, basement-membrane location; ICC/IF localisation does not replace the expected paraffin-section IHC pattern (UniProt P11047). |
| Situation | Likely cause | Next action |
|---|---|---|
| No signal in a placental positive control | The expected high-staining cytotrophoblast population may be absent from the sampled area, or the IHC detection run may have failed (HPA: High in cytotrophoblasts). | Confirm the cells on the counterstained section; check the catalog antibody's IHC-P instructions, detection reagents, and a known-working control. Treat retrieval adjustments as general assay optimisation, not a documented LAMC1 fixation effect. |
| Weak outlines despite visible tissue architecture | The antibody or chromogenic detection conditions may give inadequate contrast; HPA reports a basement-membrane pattern but supplies no target-specific fixation sensitivity (HPA: tissue IHC). | Compare with a reported higher-staining area, then review the antibody's stated IHC-P dilution and detection workflow. Optimise general IHC conditions against a positive control without inferring a specific LAMC1 retrieval requirement. |
| Strong nuclear staining dominates | Nuclear localisation is inconsistent with secreted, extracellular LAMC1 (UniProt P11047); nonspecific staining or detection background is possible. | Inspect a no-primary control, verify that the antibody was validated for IHC, and compare the same structures with another validated antibody if available (HPA: antibody IHC Enhanced). |
| Strong signal in a cell population scored not detected | The signal may belong to adjacent matrix, or arise from cross-reactivity or endogenous detection activity; HPA's negative calls are cell-specific (HPA: tissue IHC). | Review the cell boundaries and surrounding basement membrane, then run no-primary and appropriate detection controls before scoring those cells as positive. |
| Uniform brown haze obscures structural staining | Nonspecific binding, incomplete washing, or excessive chromogen development are general IHC possibilities; the expected pattern is structural (HPA: basement membranes and smooth muscle). | Compare the no-primary section, inspect blank spaces and section edges, then adjust general blocking, washing, or chromogen development as the control result indicates. |
| A negative comparator appears wholly positive | A not-detected HPA entry applies to its named cells; extracellular basement membrane may still be present in the tissue (HPA: tissue IHC; UniProt P11047). | Score the named cells separately from extracellular outlines. If the cells themselves stain, investigate detection background and antibody specificity before changing the interpretation. |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — Medium consistency between antibody staining and RNA expression data. At least one protein variant secreted, tissue location of RNA and protein might differ and correlation is complex. Antibody staining in cells/structures not annotated, view images.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Placenta | Cytotrophoblasts | High | Protein (IHC) | HPA → |
| Breast | Adipocytes | Medium | Protein (IHC) | HPA → |
| Heart muscle | Cardiomyocytes | Medium | Protein (IHC) | HPA → |
| Kidney | Cells in glomeruli | Medium | Protein (IHC) | HPA → |
| Lung | Alveolar cells | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Cerebellum | Cells in granular layer | Not detected | Protein (IHC) | HPA → |
| Duodenum | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Epididymis | Glandular cells | Not detected | Protein (IHC) | HPA → |
Troubleshoot LAMC1 staining by checking basement membrane localisation, processing conditions and controls before comparing signal across sections.
PA1581 has real IHC(P) data from human intestinal cancer tissue (PA1581 image caption). Human, mouse, and rat are listed as reactive species (catalog: reactivity); no IF data is supplied (catalog: IF image alts).
PA1581 is listed for IHC and WB, with human, mouse, and rat reactivity (catalog: applications; catalog: reactivity). Its IHC(P) image shows human intestinal cancer tissue (PA1581 image caption).
Which to pick: Choose PA1581 for paraffin-section tissue IHC: its own image documents IHC(P) on human intestinal cancer tissue, and its listed IHC dilution is 0.5–1 μg/mL (PA1581 image caption; datasheet: IHC dilution). No IF/ICC SKU or IF figure is supplied (catalog: applications; catalog: IF image alts). For mouse or rat samples, PA1581 lists reactivity, but its supplied IHC image shows human tissue only; the fixative is unreported (catalog: reactivity; PA1581 image caption).