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- Table of Contents
Plan chromogenic MMP14 IHC in paraffin sections around the observed cytoplasmic tissue pattern (HPA tissue IHC). Start with the documented 1:25 A00656 dilution (datasheet A00656), then score staining by cell type and compartment in light of MMP14’s membrane topology (UniProt).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Cytoplasmic staining in tissues (HPA tissue IHC) | |
| Staining pattern | Cytoplasmic staining in several tissue cell types (HPA tissue IHC) | |
| Antigen retrieval | Citrate pH 6 HIER, heat-mediated (datasheet A00656) | |
| Positive control | Adipose tissue+4 more · see all | |
| Negative control | Bone marrow+4 more · see all |
| Fixation | Formaldehyde-fixed paraffin sections are documented (selected-SKU IHC image A00656) | |
| Caveat | Staining has medium consistency with RNA expression (HPA tissue IHC) | |
| Regulation | Specific expression regulation is not reported (UniProt) | |
| Isoform / epitope | 0 isoforms annotated; extracellular versus cytoplasmic epitope matters (UniProt) |
The catalog antibody’s IHC-P protocol is presented alongside published protocols for human pleural mesothelioma (PMC2737627) and rat bone (PMC13101557).
| Sample | Formaldehyde-fixed, paraffin-embedded human lung adenocarcinoma tissue (datasheet A00656) |
| Fixation | Image formalin-fixed; duration unreported (datasheet A00656); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: Citrate pH 6 (datasheet A00656); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% normal serum of the secondary host, 30 min, room temperature (standard) |
| Primary antibody | Rabbit anti-MMP14, 1:25 (datasheet A00656) |
| Primary incubation | 1 hours at 37°C (datasheet A00656) |
| Detection | HRP-polymer secondary, DAB chromogen 5–10 min (standard) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | MMP14-positive staining in adipocytes of adipose tissue (HPA tissue IHC: Medium). HPA tissue profile: Cytoplasmic expression in several tissues. No signal in the no-primary control. |
MMP14 is a membrane protein with an extracellular region and a short cytoplasmic tail; UniProt also lists cytoplasmic localization (UniProt P50281 topology and subcellular location). On paraffin sections, expect chiefly cytoplasmic staining in selected cells, including endometrial stromal cells and bronchial basal cells at medium intensity (HPA tissue IHC). Interpret this pattern with care: HPA rates its tissue IHC Approved, with medium consistency against RNA expression (HPA tissue IHC).
| Selected endometrial stromal cells or bronchial basal cells show moderate cytoplasmic chromogen, with defined cell boundaries. | This fits the reported medium staining in those cell populations and HPA's overall cytoplasmic tissue profile (HPA tissue IHC). A membrane accent is plausible from MMP14 topology, but the supplied tissue IHC profile does not require a crisp membrane rim (UniProt P50281 topology; HPA tissue IHC). |
| The dominant signal is confined to nuclei, with little corresponding cytoplasmic or cell surface staining. | Treat a nuclear-only pattern as suspect: the supplied localization records list cell membrane and cytoplasm, while HPA describes cytoplasmic tissue staining (UniProt P50281 subcellular location; HPA tissue IHC). Check a known-positive cell population and controls before assigning this signal to MMP14 (general IHC practice). |
| Hematopoietic cells throughout bone marrow, or germinal center cells in lymph node, stain as strongly as the chosen positive cells. | Those specific populations were reported as not detected in HPA tissue IHC; widespread staining there raises concern for nonspecific binding or endogenous chromogenic activity (HPA tissue IHC; general IHC practice). HPA's result is an assay observation, not proof that every cell in those tissues lacks MMP14. |
| Brown color spreads across extracellular spaces, section edges, or unrelated cell populations without clear cellular structure. | An indiscriminate pattern cannot be assigned to the reported cytoplasmic distribution (HPA tissue IHC). Inspect a primary-antibody-omission control for detection-system background, and review blocking, washes, and chromogen development (general IHC practice). |
| A technically intact section shows no signal in endometrial stromal cells or bronchial basal cells. | These are reported medium-positive populations, so an entirely blank result warrants assay troubleshooting (HPA tissue IHC). Their HPA level is an observation under that assay, not a guaranteed intensity with another antibody or workflow; compare tissue integrity and assay controls before calling MMP14 absent (general IHC practice). |
| Topology and epitope side | MMP14 spans residues 542–562; residues 112–541 are extracellular and 563–582 cytoplasmic (UniProt P50281 topology). The supplied record does not identify an antibody epitope, so topology alone cannot predict which staining component that antibody will emphasize. |
| Precursor processing | The signal peptide occupies residues 1–20, the propeptide 21–111, and the annotated mature chain 112–582 (UniProt P50281 processing). If an antibody's epitope becomes known, compare it with these regions before interpreting differences between precursor and mature protein; no epitope is supplied here. |
| Strength of tissue evidence | HPA calls the tissue IHC profile Approved and describes medium consistency between antibody staining and RNA data (HPA tissue IHC). Its medium and not-detected labels describe particular cell populations; they should guide comparator selection without becoming universal expression rules (HPA tissue IHC). |
| IF/ICC Q&A: should the IHC pattern be copied into IF? | No. On the separate ICC-IF record, MMP14 is mainly cytosolic, with additional intermediate-filament localization; both locations are approved (HPA subcellular ICC-IF). Those observations help interpret IF images but do not specify a paraffin IHC staining requirement or an IF protocol. |
| Situation | Likely cause | Next action |
|---|---|---|
| Positive comparator is blank. | The tested stain may lack detectable signal, or the selected section may not contain the reported positive cells (HPA tissue IHC; general IHC practice). | Locate endometrial stromal or bronchial basal cells on the section, then check antibody and detection controls before interpreting the study tissue (HPA tissue IHC; general IHC practice). |
| All cells appear brown. | Nonspecific detection or excessive chromogen development can obscure the selective HPA pattern (HPA tissue IHC; general IHC practice). | Compare a primary-antibody-omission control; review blocking, washing, and development time using general IHC practice. |
| The signal appears exclusively nuclear. | This conflicts with the supplied membrane and cytoplasmic localization evidence (UniProt P50281 subcellular location; HPA tissue IHC). | Recheck morphology and controls, then repeat interpretation against a reported-positive cell population (HPA tissue IHC; general IHC practice). |
| Bone marrow hematopoietic cells or lymph node germinal centers stain strongly. | That conflicts with HPA's not-detected observations for those cell populations; nonspecific antibody or detection activity is possible (HPA tissue IHC; general IHC practice). | Run an omission control and compare staining with a reported medium-positive population on a separate control section (HPA tissue IHC; general IHC practice). |
| A different antibody gives a different balance of cytoplasmic and membrane signal. | The supplied antibodies have IHC Approved status, but their epitopes are unspecified; topology cannot establish equivalence (HPA antibodies; UniProt P50281 topology). | Compare each antibody's own controlled pattern with the HPA tissue profile; avoid inferring epitope recognition from staining alone (HPA tissue IHC; general IHC practice). |
| Retrieval changes the amount of visible stain. | The supplied UniProt and HPA records provide no MMP14-specific fixation or retrieval sensitivity evidence. | Treat retrieval as an assay variable: compare controlled sections and retain the condition that yields interpretable cellular staining with low background (general IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Approved — Medium consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Medium | Protein (IHC) | HPA → |
| Breast | Adipocytes | Medium | Protein (IHC) | HPA → |
| Bronchus | Basal cells | Medium | Protein (IHC) | HPA → |
| Cervix | Glandular cells | Medium | Protein (IHC) | HPA → |
| Duodenum | Glandular cells | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Cerebellum | Cells in granular layer | Not detected | Protein (IHC) | HPA → |
| Lymph node | Germinal center cells | Not detected | Protein (IHC) | HPA → |
| Salivary gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Spleen | Cells in red pulp | Not detected | Protein (IHC) | HPA → |
Troubleshoot MMP14 staining in paraffin sections by checking retrieval, compartment, cell identity, and controls before comparing chromogenic signal across samples.
All three antibodies list human, mouse and rat reactivity (catalog). Their IHC figures show human lung adenocarcinoma, intestinal cancer, placenta and kidney, plus rat cardiac muscle (figure captions).
A00656 shows IHC-P in formaldehyde-fixed, paraffin-embedded human lung adenocarcinoma (A00656 caption); M00656 shows IHC in paraffin-embedded human kidney, with fixative unreported (M00656 caption). PA2147 shows IHC(P) in human intestinal cancer and placenta and rat cardiac muscle; fixative is unreported (PA2147 captions).
Which to pick: For tissue IHC, choose A00656 when its documented formaldehyde fixation, citrate retrieval and 1:25 dilution fit your sections (A00656 caption); PA2147 provides human intestinal cancer, placenta and rat cardiac muscle examples, with fixative unreported (PA2147 captions). For IF/ICC, M00656 is the only listed option, with a 1:50 IF dilution and rabbit monoclonal clone BFD-13 (M00656 catalog); its IHC figure shows paraffin-embedded human kidney, with fixative unreported (M00656 caption). For cross-species planning, all three list human, mouse and rat reactivity (catalog), while PA2147 has the rat IHC example (PA2147 caption).