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- Table of Contents
Plan RRM2 staining in paraffin sections using its observed intestinal and lymphoid tissue pattern (HPA tissue IHC). This guide covers fixation, controls and interpretation of staining that may vary with cell-cycle phase (UniProt).
Expected localisation, validated protocols, controls and antibodies — the at-a-glance facts below, then the full design guide.
| Expected localisation | Membranous and cytoplasmic tissue staining (HPA tissue IHC) | |
| Staining pattern | Enterocytes and germinal centres: membranous/cytoplasmic (HPA tissue IHC) | |
| Antigen retrieval | EDTA pH 8.0 HIER, heat-mediated (datasheet PB9817) | |
| Positive control | Appendix+4 more · see all | |
| Negative control | Adipose tissue+4 more · see all |
| Fixation | Keep fixation conditions consistent across sections. (standard IHC practice; not target-specific) | |
| Caveat | Cell-cycle phase may shift cytoplasmic versus nuclear signal (UniProt) | |
| Regulation | Expression regulation is unreported (UniProt) | |
| Isoform / epitope | 2 isoforms; epitope differences are unspecified (UniProt) |
The catalog antibody’s IHC-P protocol is followed by 3 published RRM2 IHC protocols, each using the conditions reported for its own tissue and antibody.
| Sample | Paraffin-embedded human mammary cancer tissue; fixative not specified (datasheet PB9817) |
| Fixation | Image fixative and duration unreported (datasheet PB9817); verify before use. |
| Sectioning | 4–5 µm sections on charged slides (standard) |
| Deparaffinisation | Xylene, graded ethanol series to water (standard) |
| Antigen retrieval | Heat retrieval: EDTA pH 8.0 (datasheet PB9817); 20 min, 95–100 °C (standard) |
| Peroxidase block | 3% H2O2, 10 min, room temperature (standard) |
| Blocking | 10% goat serum (datasheet PB9817) |
| Primary antibody | Rabbit anti-RRM2, 0.5-1μg/ml (datasheet PB9817) |
| Primary incubation | Overnight at 4 °C (datasheet PB9817) |
| Detection | Streptavidin-biotin complex (SABC), DAB chromogen (datasheet PB9817) |
| Counterstain | Hematoxylin, blue, dehydrate and mount (standard) |
| Expected result | RRM2-positive staining in enterocytes of appendix (HPA tissue IHC: Medium). HPA tissue profile: Membranous and cytoplasmic expression mainly in lymphoid germinal centra and intestinal tract. No signal in the no-primary control. |
RRM2 staining is expected mainly in the cytoplasm of intestinal enterocytes and cells in lymphoid germinal centers (HPA tissue IHC). HPA rates its tissue IHC reliability Enhanced, with medium consistency between staining and RNA expression (HPA tissue IHC). Cytoplasmic localization, with possible nuclear localization in G2, fits a protein with no transmembrane segment (UniProt P31350).
| Enterocytes show moderate cytoplasmic staining, sometimes with membranous accentuation. | This fits the reported medium enterocyte staining across the sampled intestinal tissues and HPA’s cytoplasmic and membranous tissue profile (HPA tissue IHC). Judge the signal in identified cells, rather than treating every unstained neighbor as a failed reaction (general IHC practice). |
| Staining is concentrated in a lymphoid germinal center; nearby cells stain less. | This fits the reported emphasis on lymphoid germinal centers, although lymph node germinal center cells are listed at a low level (HPA tissue IHC). Do not require every lymphoid cell to stain equally (HPA tissue IHC). |
| A sharp membrane-only outline dominates, without convincing intracellular signal. | Review this as a compartment mismatch: HPA reports cytoplasmic and membranous tissue staining, while cytosol is the supported main ICC-IF location and RRM2 lacks a transmembrane segment (HPA tissue IHC; HPA ICC-IF; UniProt P31350). Membranous accentuation alone is not grounds to reject a slide (HPA tissue IHC). |
| Cells listed as not detected stain as strongly as the expected positive cells. | Consider cross-reactivity or endogenous detection activity, particularly if the signal also appears in reagent controls (general IHC practice). HPA lists adipocytes in adipose tissue and hematopoietic cells in bone marrow as not detected in its sampled tissue IHC (HPA tissue IHC). |
| A known-positive intestinal section has no discernible enterocyte signal. | Treat the run as inconclusive until a control section performs as expected (general IHC practice). HPA reports medium staining in enterocytes of appendix, colon, duodenum, rectum and small intestine; that reference pattern supports a positive-control choice but does not guarantee every specimen will stain (HPA tissue IHC). |
| Cell identity and tissue context | HPA reports medium staining in enterocytes of appendix, colon, duodenum, rectum and small intestine, and a profile centered on lymphoid germinal centers and the intestinal tract (HPA tissue IHC). Compare like cell types before judging intensity (general IHC practice). |
| Compartment and cell cycle | RRM2 is cytoplasmic in S phase and may localize to the nucleus in G2 (UniProt P31350). A nuclear component can therefore be plausible; interpret it alongside morphology and the cytoplasmic signal, without inferring cell-cycle phase from RRM2 staining alone (UniProt P31350; general IHC practice). |
| Topology and processing | UniProt lists no transmembrane segment, signal peptide or propeptide, and annotates a chain spanning residues 1–389 (UniProt P31350). These annotations give no basis to expect a secreted or shed staining pattern (UniProt P31350). |
| Antibody evidence and RNA comparison | The listed IHC antibody, HPA056994, has Enhanced validation, while overall staining-to-RNA consistency is medium (HPA antibodies; HPA tissue IHC). Bone marrow has tissue-enhanced RNA specificity yet its sampled hematopoietic cells are listed as not detected by IHC; RNA enrichment alone is not a protein-positive control (HPA tissue IHC). |
| Isoforms and phosphorylation | UniProt annotates 2 isoforms and phosphoserine 20 and phosphothreonine 33 (UniProt P31350). The supplied evidence does not locate the IHC antibody’s epitope or establish isoform- or phosphorylation-specific staining; do not assign a compartment pattern to either modification (UniProt P31350). |
| IF/ICC Q&A: where should RRM2 appear? | Mainly in the cytosol, with additional supported nucleoplasmic localization (HPA ICC-IF). This answers localization for the separate IF/ICC application; use the tissue IHC observations to assess paraffin sections (HPA tissue IHC; HPA ICC-IF). |
| Situation | Likely cause | Next action |
|---|---|---|
| No staining in the intestinal positive-control section. | The staining run may have failed, or the chosen section may lack assessable enterocytes (general IHC practice). HPA reports medium enterocyte staining in several intestinal tissues, not guaranteed positivity in every specimen (HPA tissue IHC). | Confirm enterocytes on the counterstained section, inspect the same-run detection controls, and repeat with a suitable known-positive section if needed (general IHC practice). Do not score the test section negative while its positive control fails (general IHC practice). |
| Strong signal appears in cells expected to be negative. | Cross-reactivity or endogenous detection activity is possible (general IHC practice). HPA lists adipocytes in adipose tissue and several other sampled cell types as not detected (HPA tissue IHC). | Check morphology and compare a primary-antibody omission control; address endogenous detection activity according to the chromogenic system if the control also stains (general IHC practice). Interpret the HPA negatives at the listed cell-type level (HPA tissue IHC). |
| Diffuse color covers cells and surrounding tissue. | Non-specific binding, residual detection reagents or excessive chromogen development can obscure localization (general IHC practice). This appearance does not establish an RRM2 compartment (UniProt P31350; general IHC practice). | Inspect the reagent control, washing and development time; adjust blocking or reagent concentration within the validated IHC workflow as indicated by the controls (general IHC practice). Reassess cell-specific staining after background clears (general IHC practice). |
| Only a crisp cell-surface rim is visible. | The result may reflect non-specific membrane-associated signal, although HPA does describe membranous and cytoplasmic tissue staining (HPA tissue IHC; general IHC practice). RRM2 has no annotated transmembrane segment (UniProt P31350). | Compare the rim with intracellular staining in the same cells and with the reagent control; retain membranous accentuation only when the overall cell and tissue pattern fits the HPA observation (HPA tissue IHC; general IHC practice). |
| Nuclear staining appears in a subset of otherwise plausible positive cells. | Nuclear localization can occur in G2, and HPA ICC-IF supports additional nucleoplasmic localization (UniProt P31350; HPA ICC-IF). Nuclear staining alone cannot establish G2 identity (general IHC practice). | Review cytoplasmic signal, cell identity, morphology and controls before classifying the nuclear component as specific (HPA tissue IHC; general IHC practice). Avoid using nuclear intensity alone as an RRM2-positive call (UniProt P31350; general IHC practice). |
| Bone marrow is unstained despite its tissue-enhanced RNA designation. | HPA lists tissue-enhanced RNA specificity in bone marrow but reports hematopoietic cells as not detected in its sampled IHC (HPA tissue IHC). The two readouts need not yield the same positive-control choice (HPA tissue IHC). | Assess run performance with a section containing the HPA-reported medium-staining intestinal enterocytes, then report the bone-marrow result at the observed cell-type level (HPA tissue IHC; general IHC practice). |
Comprehensive Human Protein Atlas IHC scoring per tissue (reliability: Enhanced — Medium consistency between antibody staining and RNA expression data.). Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Appendix | Enterocytes | Medium | Protein (IHC) | HPA → |
| Colon | Enterocytes | Medium | Protein (IHC) | HPA → |
| Duodenum | Enterocytes | Medium | Protein (IHC) | HPA → |
| Rectum | Enterocytes | Medium | Protein (IHC) | HPA → |
| Small intestine | Enterocytes | Medium | Protein (IHC) | HPA → |
| Tissue | Cell type | Level | Evidence | Source |
|---|---|---|---|---|
| Adipose tissue | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Adrenal gland | Glandular cells | Not detected | Protein (IHC) | HPA → |
| Bone marrow | Hematopoietic cells | Not detected | Protein (IHC) | HPA → |
| Breast | Adipocytes | Not detected | Protein (IHC) | HPA → |
| Bronchus | Respiratory epithelial cells | Not detected | Protein (IHC) | HPA → |
Use the matched paraffin-section method as the starting point, then interpret RRM2 staining against compartment, cell type, and section-level controls (datasheet PB9817; UniProt P31350; HPA tissue IHC).
PB9817 has a human paraffin-section IHC image (PB9817 image caption). M01978 lists human IF/ICC applications, with no IF image supplied (M01978 applications; M01978 image payload).
The rendered PB9817 card shows RRM2 staining in a paraffin-embedded human mammary cancer section (PB9817 image caption). PB9817 lists IHC and human, mouse, and rat reactivity; its pictured IHC result is from human tissue (PB9817 applications/reactivity; PB9817 image caption).
Which to pick: Choose PB9817 for paraffin-section IHC: its image caption reports EDTA retrieval at pH 8.0 and 1 μg/ml primary antibody in human mammary cancer tissue; the fixative is unreported (PB9817 image caption). Choose M01978 for human IF/ICC based on its listed applications and rabbit monoclonal clone AEAE-18; no IF image is supplied (M01978 catalog payload). For cross-species work, PB9817 lists human, mouse, and rat reactivity, while its IHC image documents human tissue only (PB9817 reactivity; PB9817 image caption).