SMAD4 · Western blot design guide

SMAD4 Western Blot Planning Guide

Plan a SMAD4 Western blot around the catalog-observed 60.4 kDa band, image-backed PB9397 evidence, HPA controls, and verified protocol records.

Evidence assembled July 2026 · For research use; verify linked source records and product datasheet before use
Western blot protocol sheet for SMAD4 (SMAD4): expected band 60.4 kDa, antibody PB9397, and guide-derived SDS-PAGE protocol steps
SMAD4 Western blot protocol sheet — expected band 60.4 kDa, antibody PB9397, controls and PMC citations. Open the full SMAD4 WB guide →

SMAD4 Western Blot Experimental Design Guide

Expected bands, documented protocol parameters, controls and antibodies — the at-a-glance facts below, then the full design guide.

Must know before running
Expected band 60.4 kDa
Observed band Not reported — verify product WB image
Gel 12-15%
Positive control ⓘ Colon
Negative control ⓘ Lymph node
Important caveats
Reasons your observed band may differ from the expected size.
ⓘ Calculated mass 60.4 kDa
ⓘ Localization Cytoplasm / Nucleus
ⓘ Processing / PTM Record-dependent
ⓘ Reactivity Human / Mouse / Rat
Section 1

Real Curated SMAD4 Western Blot Protocols

Start with the molecular-weight rule, then compare verified publication-derived conditions.

Recommended Western blot protocol parameters
Sample / lysateAppendix
Gel %12-15%
Load20-30 µg total protein per lane
TransferSemi-dry, standard transfer
Membrane0.45 µm PVDF
Blocking5% non-fat milk or 5% BSA in TBST
PrimaryPB9397 at datasheet starting dilution
Primary incubationOvernight at 4 °C with gentle agitation
SecondarySpecies-matched HRP conjugate at validated dilution
Wash3 × 5 min in TBST
DetectionChemiluminescent substrate
ExposureBracket exposures to avoid saturation
Section 2

What Is the Expected SMAD4 Western Blot Band Size?

Use the product-observed 60.4 kDa band as the primary planning value and retain the UniProt calculated mass as context.

What am I looking at on my blot?
60.4 kDaMatches the authoritative product WB observation.
60.4 kDa calculatedUse as UniProt context, not as a replacement observed band.
Unexpected additional signalDo not assign identity without orthogonal positive/negative controls.
💡Expected SMAD4 appearancePlan around 60.4 kDa and keep the calculated mass as supporting context.
How each factor affects band size
Catalog-observed band60.4 kDa; use this as the primary experimental expectation.
Calculated mass60.4 kDa from UniProt Q13485; retain as context.
Gel selection12-15%; shared with the recommended protocol and poster.
Specificity checkCompare the lead HPA positive and negative controls with PB9397.
Why is my band missing or off?
SituationLikely causeNext action
60.4 kDaMatches the authoritative product WB observation.Confirm with orthogonal controls and the linked product record.
Additional bandMay reflect processing, modification, or non-specific signal.Run a dilution series and compare positive/negative controls.
Weak signalTarget abundance or transfer may be limiting.Verify transfer, increase positive-control abundance, and bracket exposure.

Sample controls for SMAD4 Western blot

🧪Use Colon as the first positive-control candidate and Lymph node as the HPA Not detected negative candidate.
Positive control: Colon (High)
Negative control: Lymph node (Not detected)
HPA protein score determines control status; other expression data is supporting context only.

HPA tissue expression evidence for SMAD4

Comprehensive Human Protein Atlas IHC scoring per tissue. Rows are taken directly from the HPA tissue chart — click any row's HPA link to view the source.

Positive expression · recommended positive controls

TissueCell typeLevelEvidenceSource
Colon Reported tissue cells High Protein (HPA) HPA →
Lung Reported tissue cells High Protein (HPA) HPA →
Appendix Reported tissue cells High Protein (HPA) HPA →
Duodenum Reported tissue cells High Protein (HPA) HPA →

Undetected expression · recommended negative controls

TissueCell typeLevelEvidenceSource
Lymph node Reported tissue cells Not detected Protein (HPA) HPA →
Seminal vesicle Reported tissue cells Not detected Protein (HPA) HPA →
Section 3

Advanced SMAD4 Western Blot Tips

Deeper troubleshooting and optimisation questions for SMAD4, answered from its protein features.

Which band should guide the blot?
Use 60.4 kDa, the observation attached to the authoritative PB9397 WB record.
How should calculated mass be interpreted?
Treat the UniProt calculated mass as context; it does not replace the catalog-observed 60.4 kDa expectation.
Which positive control should I start with?
Start with Colon, the lead HPA protein-expression candidate.
Which negative control is defensible?
Use Lymph node as an orthogonal HPA Not detected candidate.
Which gel should I use?
Use 12-15% consistently across the quick facts, protocol table, and poster.
What transfer method to use for SMAD4 Western blot?
Use the transfer method in the recommended protocol and verify transfer before blocking.
How should PB9397 be started?
Start at the linked datasheet condition and run a three-point primary-antibody dilution test.
Which publication-derived protocols can I compare?
No verified publication protocol was supplied; use only the deterministic recommended protocol.
Boster reagents

SMAD4 Western Blot Reagents

Human/Mouse/Rat-reactive SMAD4 Western blot reagents with authoritative product imagery.

Real WB data Western blot validation image for SMAD4 using PB9397; observed band 60.4 kDa
Anti-Smad4 Antibody Picoband®
Cat # PB9397

Only image-backed, WB-validated Human/Mouse/Rat recommendations from the prepared catalog evidence are shown.

Source: prepared picoband-wb product evidence; each card retains its own SKU, URL, observed band, and authoritative WB image.

References

  1. UniProt Q13485
  2. Human Protein Atlas — SMAD4
  3. PB9397 product record
  4. PMC6345154 — SMAD4 Gene Mutation Renders Pancreatic Cancer Resistance to Radiotherapy through Promotion of Autophagy (Clinical cancer research : an official journal of the American Association for Cancer Research, 2018)
  5. PMC5354968 — Aberrant Phosphorylation of SMAD4 Thr277-Mediated USP9x-SMAD4 Interaction by Free Fatty Acids Promotes Breast Cancer Metastasis (Cancer research, 2017)
  6. PMC10243371 — Deubiquitinase USP13 promotes extracellular matrix expression by stabilizing Smad4 in lung fibroblast cells (Translational research : the journal of laboratory and clinical medicine, 2020)